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BIOINFORMATICS · GENOMICS · MACHINE LEARNING

BIOMAC LAB: PIONEERING
MICROBIAL GENOMICS.

BioMacLab brings together computational biology research, genomic data analysis, bioinformatics learning and scientific collaboration around biological questions.

BioMacLab symbol
BIOMAC LAB
Hub of Future Oriented Research

PEOPLE, RESEARCH & LEARNING CONTEXT

UPEI University of Prince Edward Island Founder academic affiliation
UNIBO Alma Mater Studiorum Co-Founder academic affiliation
GENOMICS Genomic Data Analysis Current BioMacLab research focus
ML Machine Learning Computational research direction
IMMUNO Immunoinformatics Current BioMacLab research area
TRAINING Scientific Learning Bioinformatics training and mentorship
Bioinformatics visualization
Genomic data visualization
Comparative genomics visualization
BioMacLab genomics illustration
Bioinformatics · Genomics · Machine Learning
ABOUT BIOMACLAB

Transforming bioinformatic analysis with genomics and Machine Learning

BioMacLab explores how genomics, bioinformatics and machine learning can be combined to examine complex biological data and support research questions.

Current public BioMacLab content emphasizes genomic data analysis, pangenomics, microbial genomics, immunoinformatics, antimicrobial resistance and computational approaches to drug discovery.

Genomic Analysis
Machine Learning
Microbial Genomics
Sheikh Injamamul Islam

Sheikh Injamamul Islam

Founder, BioMacLab · Doctoral Student, University of Prince Edward Island

Current BioMacLab research page
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Research Papers Listed

The current BioMacLab research page lists more than twenty peer-reviewed papers across genomics, pathogen biology, computational drug discovery and related fields.

Current About page
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Research Themes

BioMacLab publicly highlights genomic data analysis, immunoinformatics, machine learning, population genomics and microbiome or biosynthetic-gene-cluster research.

Current About page
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Researchers Listed

The current BioMacLab About page lists the founder, co-founder and four researchers in its research team section.

Current homepage
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Interns Listed

The current BioMacLab homepage lists six interns from universities in Bangladesh across biotechnology, fisheries, pharmacy and microbiology backgrounds.

CONNECTED SCIENTIFIC ECOSYSTEM

Research, analysis, learning and collaboration around biological data

BioMacLab presents research, computational analysis, scientific learning and community activity through one connected bioinformatics platform.

THE BIOMACLAB EVIDENCE PATH

Public research evidence, clearly scoped computational work, training and scientific communication are presented as connected but distinct activities.

Research Analysis Training
PEER-REVIEWED EVIDENCE

Research

Published work connected with BioMacLab researchers spans pangenomics, pathogenomics, aquaculture genomics, computational drug discovery and related fields.

20+ papers listed
COMPUTATIONAL ANALYSIS

Services

BioMacLab public content describes computational work in genomic analysis, comparative genomics, immunoinformatics and data-driven discovery.

Bioinformatics focus
SCIENTIFIC LEARNING

Training

Training and mentorship are used to help students and researchers build practical bioinformatics and computational-biology skills.

Practical learning
RESEARCH COMMUNICATION

Community

BioMacLab connects students and researchers through learning, research discussion and opportunities to communicate computational methods more clearly.

Students & researchers
COMPUTATIONAL BIOLOGY FOCUS AREAS

Computational work across genomics and data-driven discovery

The current BioMacLab website describes work across genomic data analysis, drug development, immunoinformatics, antimicrobial peptide prediction and related comparative-genomics workflows.

NGS & Genomics

Genomic Data Analysis

BioMacLab public content describes metagenomics, RNA-seq analysis, reference-based and de novo genome assembly, functional annotation and comparative genomic analysis.

Research Focus
Computational Discovery

Drug Development

Computational and predictive methods can help prioritize molecules and support data-driven investigation during early-stage drug-discovery research.

Research Focus
Immune Data

Immunoinformatics

BioMacLab describes the use of computational immunology and predictive approaches in vaccine-design and immune-related research.

Research Focus
Sequence Prediction

Antimicrobial Peptide Prediction

Machine-learning and sequence-analysis methods can help identify and prioritize antimicrobial-peptide candidates for subsequent scientific validation.

Research Focus
Comparative Genomics

Pangenome Analysis

Pangenome analysis can examine core and accessory gene content, genomic diversity and evolutionary patterns across related genomes.

Research Focus
Microbial Communities

Microbiome & Biosynthetic Gene Clusters

BioMacLab public content includes microbial-community analysis and biosynthetic-pathway research as areas of scientific interest.

Research Focus
RESEARCH INTAKE & LIFECYCLE

From a biological question to a usable computational output

A clear computational project starts by defining the biological question, data context, analysis scope and expected outputs before interpretation and communication.

Transparent Scope Methods and expected outputs are defined before analysis begins.
Documented Methods Tools, parameters and quality checks should be recorded so results can be interpreted clearly.
Evidence-Aware Reporting Outputs are communicated with their assumptions, limitations and next scientific steps.
QUESTION & DATA CONTEXT

Discuss

Clarify the biological question, available data, study context, controls and the purpose of the requested analysis.

ANALYSIS PLAN

Scope

Select appropriate computational methods, define inputs and outputs, and agree on quality-control expectations.

COMPUTATIONAL WORK

Analyze

Run the agreed analysis with documented tools, parameters and checks appropriate to the research question.

INTERPRETATION & DELIVERY

Communicate

Present outputs, interpretation boundaries, methods notes and next-step considerations in a clear research-oriented format.

PEER-REVIEWED RESEARCH EVIDENCE

Recent published work connected with BioMacLab researchers

The current BioMacLab research page lists peer-reviewed work in pangenomics, pathogenomics, aquaculture genomics, computational drug discovery and related biological research.

09 Sep 2025

Genomic insights into Bacillus sp. KNSH11 from Litopenaeus vannamei intestine: Probiotic potential, safety, and aquaculture applications

Comparative Biochemistry and Physiology Part D: Genomics and Proteomics
IF 2.4
17 Jun 2025

Benchmarking pangenome dynamics and horizontal gene transfer in Mycobacterium marinum evolution

Frontiers in Microbiology
IF 4.5
09 Jun 2025

Multiscale comparative pathogenomic analysis of Vibrio anguillarum linking serotype diversity, genomic plasticity and pathogenicity

Journal of Genetic Engineering and Biotechnology
IF 3.6
BIOINFORMATICS LEARNING & MENTORSHIP

Hands-on training, practical learning & research mentorship

BioMacLab uses training and mentorship to help learners connect biological questions with practical bioinformatics workflows and reproducible analysis habits.

Practical Training
Enquire for schedule

Python for Bioinformatics

Schedule published separately Foundational

A practical learning pathway focused on using Python concepts in biological-data and bioinformatics contexts.

Topics & Tools:
Python Biological data Reproducible notebooks Practice exercises
Participation details confirmed per training
Ask About This Training
Bioinformatics Training
Current website topic

Metagenomics Data Analysis

Dates confirmed per cohort Topic-dependent

Training content can cover the principles and practical steps used to process, compare and interpret microbial-community sequencing data.

Topics & Tools:
Sequence QC Taxonomic analysis Diversity concepts Interpretation
Participation details confirmed per training
Ask About This Training
Mentored Research
Expressions of interest

Bioinformatics Internship & Research Mentorship

Scope depends on opportunity Students & early-career researchers

Prospective interns and collaborators can contact BioMacLab with their background, interests and research idea for consideration when suitable opportunities are available.

Topics & Tools:
Literature review Bioinformatics Research communication Data interpretation
Participation details confirmed per training
Ask About This Training
LEADERSHIP

People guiding BioMacLab

BioMacLab leadership combines bioinformatics research and software-development perspectives.

Sheikh Injamamul Islam
Founder

Sheikh Injamamul Islam

Founder, BioMacLab

University of Prince Edward Island Doctoral Student
Genomics and Bioinformatics Club UPEI President

His public research profile includes work across microbial genomics, comparative genomics, pathogen biology, antimicrobial resistance and computational approaches used in biological research.

Microbial Genomics Comparative Genomics Pathogenomics Bioinformatics
Profiles:
Khandker Shahed
Co-Founder

Khandker Shahed

Programmer and Software Developer

Alma Mater Studiorum – Università di Bologna Master's Degree, Telecommunications Engineering
BioMacLab Co-Founder

He contributes software-development and technical-platform experience to BioMacLab, supporting the digital systems used to present research, learning and scientific collaboration.

Software Development Laravel Web Systems Research Platforms
Profiles:
INNOVATIVE MINDS SHAPING THE FUTURE

Meet Our Interns

The current BioMacLab website introduces students from several academic backgrounds who are listed as interns in the BioMacLab community.

Nusrat Amin
Intern
Biotechnology

Nusrat Amin

MSc in Biotechnology
Bangladesh Agricultural University
Md. Aftabur Rahman
Intern
Biotechnology

Md. Aftabur Rahman

Biotechnology & Genetic Engineering
Jahangirnagar University
Syed Asif Al Galib
Intern
Fisheries Genetics

Syed Asif Al Galib

M.S. in Fisheries Biology and Genetics
University of Dhaka
Tahmeed Rezwan
Intern
Pharmacology

Tahmeed Rezwan

MPharm, Pharmacology & Clinical Pharmacy
Independent University, Bangladesh
METHODS & REPRODUCIBLE PRACTICE

Bioinformatics workflow areas used in scientific analysis

This section summarizes workflow patterns relevant to BioMacLab research themes without presenting unverified proprietary software, repositories or infrastructure.

Genomic Analysis METHOD
Method Scope

Genome Analysis Workflow

A typical genome-analysis workflow can combine quality assessment, assembly or reference alignment, annotation and interpretation according to the biological question.

Genome analysis Annotation Quality checks Interpretation
Sequence data Tool-dependent
Context
Comparative Analysis METHOD
Method Scope

Comparative Genomics Workflow

Comparative and pangenome workflows examine conserved and variable genomic content, relatedness and evolutionary patterns across multiple genomes.

Pangenomics Comparative genomics Phylogeny Gene content
Genome sets Tool-dependent
Evidence
Predictive Analysis METHOD
Method Scope

Immunoinformatics Workflow

Immunoinformatics workflows can combine sequence-derived features and predictive tools to prioritize candidates for subsequent scientific assessment.

Immunoinformatics Prediction Sequence analysis Validation
Sequence features Tool-dependent
Context
Machine Learning METHOD
Method Scope

Peptide Prediction Workflow

Sequence analysis and machine-learning models can help prioritize peptide candidates, while experimental validation remains necessary for biological conclusions.

Peptides Machine learning Prediction Validation
Sequence models Tool-dependent
Evidence
workflow — documented computational analysis methods / quality control

> define biological question and input data

> record tools, parameters and quality checks

[BioMacLab] interpret results with assumptions and limitations

START A CONVERSATION

Have a genomics, bioinformatics, training or collaboration question?

Share the scientific context of your enquiry so BioMacLab can understand the question, available data and the type of support or collaboration you are seeking.

Clear initial scope
Evidence-aware communication
Research-focused discussion